Well, usually I like to have a console even on X11 apps, so I can see error and log messages, so I put console=true on Host.cpp and I got a running xterm that launches the X11 gui app.
All goes ok, no error and no crashes, and the xterm stays there (correctly) when I kill the X11 app.
I didn't try with a pure console app.... but I can do if you need.
Please do. I believe that could be the problem (because I do not see anything else...).
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BTW, I think it's not a bad idea to have a 'xterm' toggle on run options, sometimes it's better to have a separate console than the ide one...